THE
MUGRIDGE LAB

Understanding the chemical, structural, & molecular mechanisms that control RNA modification in the cell.


Welcome to the Mugridge Lab at the University of Delaware. We are a research lab in the Department of Chemistry & Biochemistry working at the interface of enzyme chemistry and RNA modification biology.





ABOUT



What do we do?

Our lab takes an interdisciplinary approach -- combining techniques and expertise from biochemistry, structural biology, biophysics, cell biology, and chemistry & chemical biology -- to answer challenging mechanistic questions about the regulation of RNA modification and its links to human disease.


diverse techniques


How does the cell leverage chemical complexity on RNA to control gene expression?

Organisms across all domains of life decorate their RNA molecules with an incredible diversity of chemical modifications. Modifications on mRNA and tRNA are critical for their function, affecting RNA structure, stability, and translational properties. Many of the proteins and enzymes that read, write, and erase these modifications are closely tied to human diseases ranging from neurological disorders to cancer to type 2 diabetes. While these proteins and pathways could be targets to treat these diseases, we lack a high-resolution, mechanistic understanding of how the cell installs, recognizes, and leverages chemical modifications on RNA. Multiple project areas in our lab are working to understand how the protein, cofactor, and nucleic acid interactions of RNA-modifying enzymes regulate chemical modifications on mRNA and tRNA to control gene expression and impact human disease.
mRNA




PEOPLE


Jeffrey Mugridge, PhD's picture

Jeffrey Mugridge, PhD

Principal Investigator,
Assistant Professor

mugridge@udel.edu
CV
Kasun Abeyrathne's picture

Kasun Abeyrathne

Graduate Student
Chemistry & Biochemistry
kdabey@udel.edu

Harrison Bernhard's picture

Harrison Bernhard

Graduate Student
CBI Program
hbernhar@udel.edu

Celeste DiGennaro's picture

Celeste DiGennaro

Graduate Student
joint with J. Bird Lab

CBI Program
cdigenn@udel.edu
Youmna Moawad's picture

Youmna Moawad

Graduate Student
Chemistry & Biochemistry
ymoawad@udel.edu

Nathan Podgurski's picture

Nathan Podgurski

Graduate Student
Chemistry & Biochemistry
podgursn@udel.edu

Paige Roehling's picture

Paige Roehling

Graduate Student
Chemistry & Biochemistry
roehling@udel.edu

Lana Kelly's picture

Lana Kelly

Undergraduate Student
lanamkel@udel.edu

Rebecca Payne's picture

Rebecca Payne

Undergraduate Student
rpayne@udel.edu

Samantha Plank's picture

Samantha Plank

Undergraduate Student
slplank@udel.edu

Sydney Ziemba's picture

Sydney Ziemba

Undergraduate Student
sziemba@udel.edu


Join our team!

We’re looking for curious, enthusiastic scientists with interests in biochemistry, structural biology, chemical biology, and biophysics. Students in our lab learn and use a broad range of techniques including protein expression and purification, enzymology, RNA biochemistry, cell culture, macromolecular X-ray crystallography, mass spectrometry, NMR spectroscopy, and other biophysical assays.

The Mugridge lab is actively recruiting at all levels! We have openings for graduate students in Chemistry & Biochemistry or other programs with interests at the interface of chemistry and biology, undergrads at UD interested in doing research during the academic year and over the Summer, and postdoctoral researchers with strong backgrounds in biochemistry or structural biology. Contact Jeff directly for more information.

Our values

The Mugridge lab is committed to creating a diverse, inclusive lab space where students and researchers of all backgrounds are welcomed and supported to grow and succeed as scientists. We will actively foster a dynamic, collaborative, and open lab environment where members feel free to ask challenging questions, do innovative science, and have fun doing it!





PUBLICATIONS


Elp3 uses a conserved molecular tunnel to transport acetate between distant active sites and catalyze tRNA wobble base modification
Geissler EP, Moawad Y, Roehling PN, Driscoll C, Martin K, Asare-Okai PN, Mugridge JS*. Nature Communications 2026


A novel covalent inhibitor fragment for the SARS-CoV-2 main protease identified by target-specific deep learning
Zhou W, D'Oliviera A, Dai X, Mugridge JS*, Zhang Y*. ACS Chemical Biology 2026


How ascorbate tunes the activity and substrate selectivity of Fe(II)-dependent dioxygenase superfamily enzymes
Calzini LO, Warminski M, Kowalska J, Jemielity J, Mugridge JS*. bioRxiv 2026


FTO separation-of-function mutations alter m6A versus m6Am demethylation selectivity on RNA
Eluwawalage KDA, Shimanski B, Warminski M, Katta S, Payne R, Yu Y, Kowalska J, Jemielity J, Mugridge JS*. bioRxiv 2026


Mapping the interactome of human tRNA methyltransferase TRMT1 using dual proximity labeling
D'Oliviera A, Olson S, Bernhard H, Yu Y*, Mugridge JS*. bioRxiv 2026


The Escherichia coli Radical SAM Enzyme YhcC Substitutes for the FAD-Dependent Oxidase Activity of MnmC in 5-Methylaminomethyl-2-Thiouridine tRNA Modification Under Anaerobic Conditions
Boswinkle K, Roehling PN, Narakorn J, Carell T, Dziergowska A, Dos Santos P, Mugridge JS, de Crecy-Lagard V*. bioRxiv 2026


RNA demethylase FTO uses conserved aromatic residues to recognize the mRNA 5' cap and promote efficient m6Am demethylation
Shimanski B, Marin JF, Warminski M, McKeon RM, Kowalska J, Jemielity J, Hadden-Perilla JA*, Mugridge JS*. bioRxiv 2025


Recognition and cleavage of human tRNA methyltransferase TRMT1 by the SARS-CoV-2 main protease
D'Oliviera A, Dai X, Mottaghinia S, Olson S, Geissler EP, Etienne L, Zhang Y, Mugridge JS*. eLife 2025

Selected Publications Prior to UD
Structural and molecular mechanisms for the control of eukaryotic 5'-3' mRNA decay
Mugridge JS, Coller J, Gross JD. Nature Structural and Molecular Biology 2018
Structure of the activated Edc1-Dcp1-Dcp2-Edc3 mRNA decapping complex with substrate analog poised for catalysis
Mugridge JS, Tibble RW, Ziemniak M, Jemielity J, Gross JD. Nature Communications 2018
Application of a Schizosaccharomyces pombe Edc1-fused Dcp1-Dcp2 decapping enzyme for transcription start site mapping
Paquette DR, Mugridge JS, Weinberg DE, Gross JD. RNA 2018
Structural basis of mRNA-cap recognition by Dcp1-Dcp2. Nature Structural & Molecular Biology
Mugridge JS, Ziemniak M, Jemielity J, Gross JD. Nature Structural and Molecular Biology 2016
Two-headed tetraphosphate cap analogs are inhibitors of the Dcp1/2 RNA decapping complex
Ziemniak M, Mugridge JS, Kowalska J, Rhoads RE, Gross JD, Jemielity J. RNA 2016


For a complete list of publications see: PubMed | Google Scholar



NEWS

For the latest group news, follow us on Bluesky!



Congrats to Evan, Youmna, and all other other coauthors on the final version of our Elp3 paper published in Nature Communications!

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— Mugridge Lab (@mugridgelab.bsky.social) July 9, 2026 at 10:27 AM

Lots of turnover in the lab over the past academic year! Brittany Shimanski and Luke Calzini both finished PhDs (the 3rd + 4th PhDs from the lab)! Each did nice work on the selectivity and regulation of RNA demethylases; read their preprints here: doi.org/10.1101/2025... doi.org/10.1101/2025...

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— Mugridge Lab (@mugridgelab.bsky.social) July 9, 2026 at 1:09 PM

Congrats also to Mugridge lab PhD students Paige Roehling and Harrison Bernhard, who passed their candidacy exams earlier this year!

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— Mugridge Lab (@mugridgelab.bsky.social) July 9, 2026 at 1:12 PM

We finally got out and celebrated our lab's recent NSF CAREER award today with a lab bowling and laser tag trip! Pew pew! 🔫🎳

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— Mugridge Lab (@mugridgelab.bsky.social) Jan 4, 2025 at 4:40 PM



CONTACT US

Mugridge Lab
University of Delaware
Department of Chemistry and Biochemistry
169 Brown Laboratory
Newark, DE 19711
(302) 831-3578





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